BaSiCPy
Background and Shading Correction for Optical Microscopy.
BaSiCPy is a microscopy image correction package in python (MATLAB and FIJI/ImageJ versions are also available). It achieves high-accuracy with
significantly fewer input images, and works for diverse imaging conditions with no
manual parameters required. Moreover, BaSiCPy can correct temporal drift in
time-lapse microscopy data and thus improve continuous single-cell quantification.
Manuscript
Please the original paper in Nature Communications to learn more.
Contributing to BaSiCPy
We are happy about any contributions! Before you start, check out our contributing guide.